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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAGCTTGCAGAACGTGACGCTCAAGACGCAGTCGGGCCAGACGGCTGTGGTGTCCGCCTACGCGGGACACCTGCTGTCTTGGACCAACGCTGAGGGCCAGgtacgcgcgggcacggaaccacccagggaaggggctgtcccaaagtgtcccgcgtgccgcccgcacccctccctctctccctctctctcgttccttgcttgcctctgccctccgcatcaccgctgtgctgcgaccgcctccatcgacgcaaacag

Basic information

species Chlamydomonas reinhardtii
transcript EDP03922
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|23362816|gb|BU650636.1|BU650636
EST:     TGTCCGCCTACGCGGGACACCTGCTGTCTTGGACCAACGCTGAGGGCCAG                         GACTACATCTTCATGAGTAAGAACGCGGTGTTTGCACCGCCCAAGGCCATC
genomic: TGTCCGCCTACGCGGGACACCTGCTGTCTTGGACCAACGCTGAGGGCCAGgtacgcgcgg ... acgcaaacagGACTACATCTTCATGAGTAAGAACGCGGTGTTTGCACCGCCCAAGGCCATC
EST: gi|23366171|gb|BU653991.1|BU653991
EST:     TGTCCGCCTACGCGGGACACCTGCTGTCTTGGACCAACGCTGAGGGCCAG                         GACTACATCTTCATGAGTAAGAACGCGGTGTTTGCACCGCCCAAGGCCATC
genomic: TGTCCGCCTACGCGGGACACCTGCTGTCTTGGACCAACGCTGAGGGCCAGgtacgcgcgg ... acgcaaacagGACTACATCTTCATGAGTAAGAACGCGGTGTTTGCACCGCCCAAGGCCATC