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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtagatgggggttgcgttgtagaaactggggtggtgtatatccttgattggctagtggaggagccggggcctgtgtgctaagcaattgctgcaaagcagcgccgttgacgtccctcgctccttctcttttactccgcagCCCCCCTTTCTCTTTGCGTTTGGTGA

Basic information

species Chlamydomonas reinhardtii
transcript EDP02720
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

attgctgcaaagcagcgccgttgacgtccctcgctccttctcttttactccgcagCCCCCCTTTCTCTTTGCGTTTGGTGA
                  cgttgac  putative branch site (score: 4)
                        cgtccctcgctccttc  CT-rich tract
                                        tctttta  TA-rich tract