1 5' 3' | 2 5' 3' | 3 5' 3' |
CGGTTTCAACTCCCTGAAGGACGACTACGAGCCCGGTGACCTGGGCTTCGACCCCCTGGGCCTCAAGCCCACCGACCCCGAGGAGCTCAAGGTCATGCAGgtgcgtggggcccgtgtgaggatgtggaagcggtgggcggcggacaagggtaggggaagcccagggccaggccacacttcgcagctctaccacagcacacccagccttccctccccggtatgcctgacattgccctctctgccttttctctccctctcccctcag
species | Chlamydomonas reinhardtii |
transcript | EDP01087 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACCCCCTGGGCCTCAAGCCCACCGACCCCGAGGAGCTCAAGGTCATGCAG ACCAAGGAGCTGAACAACGGCCGCCTGGCCATGATCGCCATCGCCGCCTTCEST: gi|10771595|gb|AV622418.1|AV622418
genomic: ACCCCCTGGGCCTCAAGCCCACCGACCCCGAGGAGCTCAAGGTCATGCAGgtgcgtgggg ... ctcccctcagACCAAGGAGCTGAACAACGGCCGCCTGGCCATGATCGCCATCGCCGCCTTC
EST: ACCCCCTGGGCCTCAAGCCCACCGACCCCGAGGAGCTCAAGGTCATGCAG ACCAAGGAGCTGAACAACGGCCGCCTGGCCATGATCGCCATCGCCGCCTTC
genomic: ACCCCCTGGGCCTCAAGCCCACCGACCCCGAGGAGCTCAAGGTCATGCAGgtgcgtgggg ... ctcccctcagACCAAGGAGCTGAACAACGGCCGCCTGGCCATGATCGCCATCGCCGCCTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGTTTCAACTCCCTGAAGGACGACTACGAGCCCGGTGACCTGGGCTTCGACCCCCTGGGCCTCAAGCCCACCGACCCCGAGGAGCTCAAGGTCATGCAGgtgcgtggggcccgtgtgaggatgtggaagcggtgggcggcggacaagggtaggggaagcccagggccaggccacacttcgcagctctaccacagcacacccagccttccctccccggtatgcctgacattgccctctctgccttttctctccctctcccctcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA