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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgggtcgtaagcggtggcgagatggccgttgccgcacatgggatgccagcggttgcggttcctaatcaccgccgcctaccggttctcagCGTCTCGCTCTCGCTGATTCTTCTCAATCGTCTGCCAACAATACGCGTAATAACCGTGATGCTTTCTCGCGCCCAG

Basic information

species Chlamydomonas reinhardtii
transcript EDP01063
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cacatgggatgccagcggttgcggttcctaatcaccgccgcctaccggttctcagCGTCTCGCTCTCGCTGATTCTTCTCAATCGTCTGCCAACAATACGCGTAATAACCGTGATGCTTTCTCGCGCCCAG
                         tcctaat  putative branch site (score: 2)
                                                ttctc  putative PPT