1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GGCTTCATGCAGTTCCGGCTGGGTGGTGAGCCGCGGCGGCTGGACGTGGCGGCCCTGAACGAGTCGTTGAAGgtgagggtgaggtagggggaagagggttgaaagattgggggggggggtgagatatggccgcgaggtagggagagagagaggggtgatagttatcaagcca...
species | Chlamydomonas reinhardtii |
transcript | EDP01032 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GTGGTGAGCCGCGGCGGCTGGACGTGGCGGCCCTGAACGAGTCGTTGAAG GCCGGCGGCGCGTTGCGGCTGCGCTTCCACAACCGGCCTGACGAGGCGTACEST: gi|6548565|gb|AV394349.1|AV394349
genomic: GTGGTGAGCCGCGGCGGCTGGACGTGGCGGCCCTGAACGAGTCGTTGAAGgtgagggtga ... acacacacagGCCGGCGGCGCGTTGCGGCTGCGCTTCCACAACCGGCCTGACGAGGCGTAC
EST: GTGGTGAGCCGCGGCGGCTGGACGTGGCGGCCCTGAACGAGTCGTTGAAG GCCGGCGGCGCGTTGCGGCTGCGCTTCCACAACCGGCCTGACGAGGCGTACEST: gi|6548024|gb|AV393808.1|AV393808
genomic: GTGGTGAGCCGCGGCGGCTGGACGTGGCGGCCCTGAACGAGTCGTTGAAGgtgagggtga ... acacacacagGCCGGCGGCGCGTTGCGGCTGCGCTTCCACAACCGGCCTGACGAGGCGTAC
EST: GTGGTGAGCCGCGGCGGCTGGACGTGGCGGCCCTGAACGAGTCGTTGAAG GCCGGCGGCGCGTTGCGGCTGCGCTTCCACAACCGGCCTGACGAGGCGTACEST: gi|6547878|gb|AV393662.1|AV393662
genomic: GTGGTGAGCCGCGGCGGCTGGACGTGGCGGCCCTGAACGAGTCGTTGAAGgtgagggtga ... acacacacagGCCGGCGGCGCGTTGCGGCTGCGCTTCCACAACCGGCCTGACGAGGCGTAC
EST: GTGGTGAGCCGCGGCGGCTGGACGTGGCGGCCCTGAACGAGTCGTTGAAG GCCGGCGGCGCGTTGCGGCTGCGCTTCCACAACCGGCCTGACGAGGCGTACEST: gi|6549788|gb|AV395572.1|AV395572
genomic: GTGGTGAGCCGCGGCGGCTGGACGTGGCGGCCCTGAACGAGTCGTTGAAGgtgagggtga ... acacacacagGCCGGCGGCGCGTTGCGGCTGCGCTTCCACAACCGGCCTGACGAGGCGTAC
EST: GTGGTGAGCCGCGGCGGCTGGACGTGGCGGCCCTGAACGAGTCGTTGAAG GCCGGCGGCGCGTTGCGGCTGCGCTTCCACAACCGGCCTGACGAGGCGTACEST: gi|10792178|gb|AV629544.1|AV629544
genomic: GTGGTGAGCCGCGGCGGCTGGACGTGGCGGCCCTGAACGAGTCGTTGAAGgtgagggtga ... acacacacagGCCGGCGGCGCGTTGCGGCTGCGCTTCCACAACCGGCCTGACGAGGCGTAC
EST: GTGGTGAGCCGCGGCGGCTGGACGTGGCGGCCCTGAACGAGTCGTTGAAG GCCGGCGGCGCGTTGCGGCTGCGCTTCCACAACCGGCCTGACGAGGCGTAC
genomic: GTGGTGAGCCGCGGCGGCTGGACGTGGCGGCCCTGAACGAGTCGTTGAAGgtgagggtga ... acacacacagGCCGGCGGCGCGTTGCGGCTGCGCTTCCACAACCGGCCTGACGAGGCGTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCTTCATGCAGTTCCGGCTGGGTGGTGAGCCGCGGCGGCTGGACGTGGCGGCCCTGAACGAGTCGTTGAAGgtgagggtgaggtagggggaagagggttgaaagattgggggggggggtgagatatggccgcgaggtagggagagagagaggggtgatagttatcaagcca
- - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgatagt