1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CAGCATGTCGACCGCCAAGGCCTACCGTCCCTGCAGCCTTAAGCATGCTCAGTTGCGAGCATGCAGTCGGCGAGGATCTGGCCTGAACGTTGTCTGCAGGgtaaggctgaggttcatgtccaaatggatttgagtcgcttaaggctcctgtgcgatgtcgccacgatgtaacagcacccaacatcgctgccacag
species | Chlamydomonas reinhardtii |
transcript | EDO98613 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AGTTGCGAGCATGCAGTCGGCGAGGATCTGGCCTGAACGTTGTCTGCAGG GCGAGGCGCTCTTACGACGAAGATGATAGTGCAGGGCCGAAGGAGTACGTGEST: gi|49463054|gb|BP090967.1|BP090967
genomic: AGTTGCGAGCATGCAGTCGGCGAGGATCTGGCCTGAACGTTGTCTGCAGGgtaaggctga ... gctgccacagGCGAGGCGCTCTTACGACGAAGATGATAGTGCAGGGCCGAAGGAGTACGTG
EST: AGTTGCGAGCATGCAGTCGGCGAGGATCTGGCCTGAACGTTGTCTGCAGG GCGAGGCGCTCTTACGACGAAGATGATAGTGCAGGGCCGAAGGAGTACGTG
genomic: AGTTGCGAGCATGCAGTCGGCGAGGATCTGGCCTGAACGTTGTCTGCAGGgtaaggctga ... gctgccacagGCGAGGCGCTCTTACGACGAAGATGATAGTGCAGGGCCGAAGGAGTACGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGCATGTCGACCGCCAAGGCCTACCGTCCCTGCAGCCTTAAGCATGCTCAGTTGCGAGCATGCAGTCGGCGAGGATCTGGCCTGAACGTTGTCTGCAGGgtaaggctgaggttcatgtccaaatggatttgagtcgcttaaggctcctgtgcgatgtcgccacgatgtaacagcacccaacatcgctgccacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG