Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgggttgagctgggttagcaatgcagtcgcaggctgacgagcagctgcggcgcgcgacaggacgggtggtgttgtgaacgactcattccgcacctcctcatcccaacaccactcgctccacttaacataaccctccctctctcttctccaaatgcagGACTTTGACGCCTCGTGCTTCACAGGCACCTACGTCACCGGCGACATTGATGAGGCGTACCTG

Basic information

species Chlamydomonas reinhardtii
transcript EDO97893
intron # 6
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ccaacaccactcgctccacttaacataaccctccctctctcttctccaaatgcagGACTTTGACGCCTCGTGCTTCACAGGCACCTACGTCACCGGCGACATTGATGAGGCGTACCTG
                      acataac  putative branch site (score: 3)
                       cataaccctccctctc  CT-rich tract
                   ttaacataa  TA-rich tract