1 5' 3' | 2 5' 3' | 3 5' 3' |
GCGGCCTTCGTGGCAGACGACGTTAGCAACATCATCAAGGAGTCAATTGATGCAGTGCTGCAAAACCAGCAATACAGCGAGGCGAAGgtgcgtgtgcagcgtgctcgaccctcccgtgaacgctctcaccttcacaaggacaacttttgacgttcctgcatggttgctgctgggtatgttcag
species | Chlamydomonas reinhardtii |
transcript | EDO97227 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGGAGTCAATTGATGCAGTGCTGCAAAACCAGCAATACAGCGAGGCGATT TTTAGCCAATGGACGTCGAGCTGTCTAGAACATTGCATAAAGCGCGTGGCAEST: gi|7427192|gb|AW661358.1|AW661358
genomic: AGGAGTCAATTGATGCAGTGCTGCAAAACCAGCAATACAGCGAGGCGAAGgtgcgtgtgc ... gtatgttcagGTTAGCCAATGGACGTCGAGCTGTCTAGAACATTGCATAAAGCGCCTCACA
EST: AGGAGTCAATTGATGCAGTGCTGCAAAACCAGCAATACAGCGAGGCGAAG GTTAGCCAATGGACGTCGAGCTGTCTAGAACATTGCATAAAGCGCCTCACA
genomic: AGGAGTCAATTGATGCAGTGCTGCAAAACCAGCAATACAGCGAGGCGAAGgtgcgtgtgc ... gtatgttcagGTTAGCCAATGGACGTCGAGCTGTCTAGAACATTGCATAAAGCGCCTCACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGGCCTTCGTGGCAGACGACGTTAGCAACATCATCAAGGAGTCAATTGATGCAGTGCTGCAAAACCAGCAATACAGCGAGGCGAAGgtgcgtgtgcagcgtgctcgaccctcccgtgaacgctctcaccttcacaaggacaacttttgacgttcctgcatggttgctgctgggtatgttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC