Skip to another splice site:
1  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagcattcgcagctactagacggctgacattggagttaagtgttgaggggttaccaggaggccggggggaagcgcgggaggcgtgggtagtaaccctcccgctcccctcccgccattccgccccattccgccctaactctgccgccttctaacgccgccctgcctccccgcctttctttccctccctcagTTCAACGTGAACGACGCGTGCGACGTCTTCTCGCCCTCTCTCAAGGCGACCATCAACGGCGTGCGCACCAAGGTGGCCCCCGCCATCAACAAGGCACAGA

Basic information

species Chlamydomonas reinhardtii
transcript EDO96333
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

actctgccgccttctaacgccgccctgcctccccgcctttctttccctccctcagTTCAACGTGAACGACGCGTGCGACGTCTTCTCGCCCTCTCTCAAGGCGACCATCAACGGCGTGCGCACCAAGGTGGCCCCCGCCATCAACAAGGCACAGA
           ttctaac  putative branch site (score: 1)
                 cgccgccctgcctccc  CT-rich tract
                                     tttcttt  TA-rich tract