Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|146271585|gb|ES444627.1|ES444627EST: TTGAATGGGAAGATGAAGCCACCAAAGCCCGTTTCTTGCCTACACTCAAG GCTTTTCCGGAGAACATCGACGCTGACGGCTATGAGATTTCCTTCTGAGAC
genomic: TTGAATGGGAAGATGAAGCCACCAAAGCCCGTTTCTTGCCTACACTCAAGgttctttctc ... gatgttttagGCTTTTCCGGAGAACATCGACGCTGACGGCTATGAGATTTCCTTCTGAGAC
EST:
gi|146271584|gb|ES444626.1|ES444626EST: TGNAATGGGAAGATGAAGCCACCAAAGCCCGTTTCTTGCCTACACTCAAG GCTTTTCCGGAGAACATCGACGCTGACGGCTATGAGATTTCCTTCTGAGAC
genomic: TG-AATGGGAAGATGAAGCCACCAAAGCCCGTTTCTTGCCTACACTCAAGgttctttctc ... gatgttttagGCTTTTCCGGAGAACATCGACGCTGACGGCTATGAGATTTCCTTCTGAGAC
EST:
gi|146271586|gb|ES444628.1|ES444628EST: TTGAATGGGAAGATGAAGCCACCAAAGCCCGTTTCTTGCCTACACTCAAG GCTTTTCCGGAGAACATCGACGCTGACGGCTATGAGATTTCCTTCTGAGAC
genomic: TTGAATGGGAAGATGAAGCCACCAAAGCCCGTTTCTTGCCTACACTCAAGgttctttctc ... gatgttttagGCTTTTCCGGAGAACATCGACGCTGACGGCTATGAGATTTCCTTCTGAGAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCCAAGAGGTGATCTTGTCATAGAGGCACATAAAAAATGGATAGAAATCCTTGAATGGGAAGATGAAGCCACCAAAGCCCGTTTCTTGCCTACACTCAAGgttctttctctcgcatttatctgccaaaacttctttttaattattcattcctttggatcttactctcttttttggatgttttag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC