1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtataaacaagcatacacatctttgattgttcattatgtctcttaactttgaaaacatgtttatcttctgaaattatctgatcatacatgcttttttatttctgtggatagGGTGGAGACGCGGGGTTTTCAATTGGTGCTGCAAGGAATATGAACATGCCATCCTTAATTATAGGTCCAGGATCAGGATACAACGTGAAATCAAATCCTC
species | Arabidopsis thaliana |
transcript | AT5G62760.1 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: CAAGCCAAGAACGCCAGCGGAAAGGCAAATCTGTTTGGTGGGGCGATAAG GGTGGAGACGCGGGGTTTTCAATTGGTGCTGCAAGGAATATGAACATGCCA
genomic: CAAGCCAAGAACGCCAGCGGAAAGGCAAATCTGTTTGGTGGGGCGATAAGgtataaacaa ... ctgtggatagGGTGGAGACGCGGGGTTTTCAATTGGTGCTGCAAGGAATATGAACATGCCA
atgtttatcttctgaaattatctgatcatacatgcttttttatttctgtggatagGGTGGAGACGCGGGGTTTTCAATTGGTGCTGCAAGGAATATGAACATGCCATCCTTAATTATAGGTCCAGGATCAGGATACAACGTGAAATCAAATCCTC
atctgat putative branch site (score: 4)
tgcttttttatttct putative PPT
atgcttttttattt TA-rich tract