Sequence
atgc intronic sequence ATGC exonic sequencegtatgtattaatcggtccgagtttcaagaaatctcttaagaatctttctctttttggtatgtttggtttcaataaatttggatgacgttcaattgtgcagGGGCTTATTGTTGTTCATCCTACTCGTCAACACAAATTCTGAAAACCGGAATCGTTTTTACTCCATACAGAGTTTCCTTTTTTCCGGTACATAAATATCT
Basic information
species | Arabidopsis thaliana |
transcript | AT5G45850.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|86087483|gb|DR383242.1|DR383242EST: CGATTGTGAAAACATCGTATTCACACCATGATCATGTTCGCTATTCAGAG GGGCTTATTGTTGTTCATCCTACTCGTCAACACAAATTCTGAAAACCGGAA
genomic: CGATTGTGAAAACATCGTATTCACACCATGATCATGTTCGCTATTCAGAGgtatgtatta ... aattgtgcagGGGCTTATTGTTGTTCATCCTACTCGTCAACACAAATTCTGAAAACCGGAA
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.ttctctttttggtatgtttggtttcaataaatttggatgacgttcaattgtgcagGGGCTTATTGTTGTTCATCCTACTCGTCAACACAAATTCTGAAAACCGGAATCGTTTTTACTCCATACAGAGTTTCCTTTTTTCCGGTACATAAATATCT
tttcaataaattt TA-rich tract