Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|86040086|gb|DR335841.1|DR335841EST: AGCAGATGCATGGACTGTTAAAGCACACAGATTCTCCTTATATTAGAGCG ATTTTCACAACCACAATCAAAGTTGGGATGTCATTCTTTCTTTGAGTTGCT
genomic: AGCAGATGCATGGACTGTTAAAGCACACAGATTCTCCTTATATTAGAGCGgtgagtgaat ... ttcatagcagATTTTCACAACCACAATCAAAGTTGGGATGTCATTCTTTCTTTGAGTTGCT
EST:
gi|86040085|gb|DR335840.1|DR335840EST: AGCAGATGCATGGACTGTTAAAGCACACAGATTCTCCTTATATTAGAGCG ATTTGTCACAACCACAATCAAAGTTGGGATGTCATTCTTTCTTTGAGTTGC
genomic: AGCAGATGCATGGACTGTTAAAGCACACAGATTCTCCTTATATTAGAGCGgtgagtgaat ... ttcatagcagATTT-TCACAACCACAATCAAAGTTGGGATGTCATTCTTTCTTTGAGTTGC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AACAGCGTATTGTCTTCTCTACAAATTCTTTACCATGAAACTTACAGTGAAGCAGATGCATGGACTGTTAAAGCACACAGATTCTCCTTATATTAGAGCGgtgagtgaatctcttaaccatcttttttgcattattgtcctgcataaagtatgagctaccgtgatgctataaccttgtctttttggtattggttttctta
- - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA