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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacgctcctccacatattttctagcattcaaccaaggaaaaaatccgcgccaacaccattctgacggggatttaagCGATACGAGTCTCAACCTTGCTTCTAGTCTCAAGTTGCATGACCTTGACACAAATGATATCACTAGTGAACCACTAGCTCCAGCTACGCCAGCAACTCCT

Basic information

species Arabidopsis thaliana
transcript AT5G28920.1
intron # 5
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tagcattcaaccaaggaaaaaatccgcgccaacaccattctgacggggatttaagCGATACGAGTCTCAACCTTGCTTCTAGTCTCAAGTTGCATGACCTTGACACAAATGATATCACTAGTGAACCACTAGCTCCAGCTACGCCAGCAACTCCT
                                     ttctgac  putative branch site (score: 2)
                aaaaaat  TA-rich tract