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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAAATGACACTTCCACGCCAATCGTTACCGGAGTTATTGTgtaagttttaatcataaatatcccttaatgattctaattaggaaatttcaatgttgaaatcagtttggtttctttgtgtag

Basic information

species Arabidopsis thaliana
transcript AT5G26220.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86068271|gb|DR364028.1|DR364028
EST:     GAAAATGACACTTCCACGCCNATCGTTACCGGGAGTTATTGT                         CTACACGTCAACACCAGACAAAGTGTCGAACAAATACTACTTAGGTCCA
genomic: GAAAATGACACTTCCACGCCAATCGTTACCGG-AGTTATTGTgtaagtttta ... ctttgtgtagCTTCACGTCAACACCAGACAAAGTGTCGAACAAATACTACTTAGGTCCA