1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtacgtaacctatgagtcaggggattctgtttctttctaactgttatatacagttgaatctgatctatttctttcaagcttccagttttcctccaagcttaatgttctgtgttataattaatgtgccaatttgaagttgattgtatgaatgatcattgagtcaaataatcttatagGTTTGATGTGCAAGCTGGAGTGAATCCCAGAATTGGATCTGGTGATAGGGATGAGGCACTATCTGGATTCTTAGGAAATTTGACAATGGGGGGATTAGGT
species | Arabidopsis thaliana |
transcript | AT5G18420.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GTGGGTGTGATCCTAACTCTCCAGA GTTTGATGTGCAAGCTGGAGEST: gi|125184213|gb|EL199167.1|EL199167
genomic: GTGGGTGTGATCCTAACTCTCCAGAgtacgtaacc ... aatcttatagGTTTGATGTGCAAGCTGGAG
EST: ATCCTAACTCTCCAGA GTTTGATGTGCAAGCTGGAGTGAATCCCAGAATTGGATCTGGTGATAGGGA
genomic: ATCCTAACTCTCCAGAgtacgtaacc ... aatcttatagGTTTGATGTGCAAGCTGGAGTGAATCCCAGAATTGGATCTGGTGATAGGGA
tgtgccaatttgaagttgattgtatgaatgatcattgagtcaaataatcttatagGTTTGATGTGCAAGCTGGAGTGAATCCCAGAATTGGATCTGGTGATAGGGATGAGGCACTATCTGGATTCTTAGGAAATTTGACAATGGGGGGATTAGGT
agttgat putative branch site (score: 5)
tcaaataatcttata TA-rich tract