1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gttctcttatcattttcatgttctgaaactttttttggttttcattttacgtaaaaatttggtagctctaaaattctctttctttcgtgaattgtagGAGGATGATAAAATCGTTGAACTTGTAAAAAAATATGGACCTGCCAAATGGTCTGTCATCGCCAAGTCCTTACCAGGTCGTATTGGGAAACAATGTCGAG
species | Arabidopsis thaliana |
transcript | AT5G02320.2 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GGCAGAAAGTTCTTAATCCAGAGCTTGTTAAAGGACCTTGGACTCAAGAG GAGGATGATAAAATCGTTGAACTTGTNNNNNNNTATGGACCTGCCAAATGG
genomic: GGCAGAAAGTTCTTAATCCAGAGCTTGTTAAAGGACCTTGGACTCAAGAGgttctcttat ... tgaattgtagGAGGATGATAAAATCGTTGAACTTGTAAAAAAATATGGACCTGCCAAATGG
cattttacgtaaaaatttggtagctctaaaattctctttctttcgtgaattgtagGAGGATGATAAAATCGTTGAACTTGTAAAAAAATATGGACCTGCCAAATGGTCTGTCATCGCCAAGTCCTTACCAGGTCGTATTGGGAAACAATGTCGAG
ctctaaa putative branch site (score: 3)
ttctctttctttcgt CT-rich tract
taaaaattt TA-rich tract