1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtatgtcatgccatttaaaacttacaaatcatttacaactgaagtcaaaataaacggactaaccagtaataaccgatgttggtatttggcagCATGTCTTGGAGAAAGGGACATCTGAAGAAAGGGAGAGGATTGGGAGAAAACTCTCAGGGCACATCGTGCAACTTAGCCTCCACAAATTTGCGTCAAATG
species | Arabidopsis thaliana |
transcript | AT4G25880.3 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TATGGTAATTATGTCACACAG CATGTCTTGGAGAAAGGGACATCTGAAGAAAGGGAGAGGATTGGGAGAAAAEST: gi|116443221|gb|EG485813.1|EG485813
genomic: TATGGTAATTATGTCACACAGgtatgtcatg ... tatttggcagCATGTCTTGGAGAAAGGGACATCTGAAGAAAGGGAGAGGATTGGGAGAAAA
EST: TTTCCAAGGACCAATATGGTAATTATGTCACACAG CATGTCTTGGAGAAAGGGACATCTGAAGAAAGGGAGAGGATTGGGAGAAAA
genomic: TTTCCAAGGACCAATATGGTAATTATGTCACACAGgtatgtcatg ... tatttggcagCATGTCTTGGAGAAAGGGACATCTGAAGAAAGGGAGAGGATTGGGAGAAAA
actgaagtcaaaataaacggactaaccagtaataaccgatgttggtatttggcagCATGTCTTGGAGAAAGGGACATCTGAAGAAAGGGAGAGGATTGGGAGAAAACTCTCAGGGCACATCGTGCAACTTAGCCTCCACAAATTTGCGTCAAATG
taataac putative branch site (score: 1)
tcaaaataaa TA-rich tract