Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|164071488|gb|ES203582.1|ES203582EST: TTGCACTTGTCTCAAAGGAAATCCCTGGTTTGACGAAAGCTGGTCATACT GTAGGGAAGATGTCAGAAATGGAAACCTCTGTTGGCTTG
genomic: TTGCACTTGTCTCAAAGGAAATCCCTGGTTTGACGAAAGCTGGTCATACTgtgagttgtt ... ctctcaacagGTAGGGAAGATGTCAGAAATGGAAACCTCTGTTGGCTTG
EST:
gi|124910147|gb|EH984227.1|EH984227EST: TGTCTCAAAGGAAATCCCTGGTTTGACGAAAGCTGGTCATACT GTAGGGAAGATGTCAGAAATGGAAACCTCTGTTGGCTTGCCTCCGAATTCA
genomic: TGTCTCAAAGGAAATCCCTGGTTTGACGAAAGCTGGTCATACTgtgagttgtt ... ctctcaacagGTAGGGAAGATGTCAGAAATGGAAACCTCTGTTGGCTTGCCTCCGAATTCA
EST:
gi|164033118|gb|ES207814.1|ES207814EST: TGCACTTGTCTCAAAGGAAATCCCTGGTTTTGACGAAAGCTGGTCATACT GTAGGGAAGATGTCAGAAATGGAAACCTCTGTTGGCTTG
genomic: TGCACTTGTCTCAAAGGAAATCCCTGG-TTTGACGAAAGCTGGTCATACTgtgagttgtt ... ctctcaacagGTAGGGAAGATGTCAGAAATGGAAACCTCTGTTGGCTTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GTGGCAAAAACTTGGAAACATGAGTCAAGAAGAGGCAATGGAGCAGTATCTTGCACTTGTCTCAAAGGAAATCCCTGGTTTGACGAAAGCTGGTCATACTgtgagttgtttgatcttgagggtttgaatatcacctggatgttttaatggcttttgaggtctgagaaacttttgactttgctctctcaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG