1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GTGATCTTCATTGGAAAATAGTTTCAGTTTACATAAACAGGCTAAATCAAgtaagattccttcttgagcattgatattagtgatctgatgaactttggagagaggaaagaaagattaaagtgagatacattattagtgaatcagtggaaa...
species | Arabidopsis thaliana |
transcript | AT3G22810.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GTGATCTTCATTGGAAAATAGTTTCAGTTTACATAAACAGGCTAAATCAA GTTATATTGAAGATGEST: gi|164176029|gb|EL997614.1|EL997614
genomic: GTGATCTTCATTGGAAAATAGTTTCAGTTTACATAAACAGGCTAAATCAAgtaagattcc ... gaacatgaagGTTATATTGAAGATG
EST: GTGATCTTCATTGGAAAATAGTTTCAGTTTACATAAACAGGCTAAATCAA GTTATATTGAAGATGAAGAGCAGGCATGTAGGAGGGACCTTCACG
genomic: GTGATCTTCATTGGAAAATAGTTTCAGTTTACATAAACAGGCTAAATCAAgtaagattcc ... gaacatgaagGTTATATTGAAGATGAAGAGCAGGCATGTAGGAGGGACCTTCACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGATCTTCATTGGAAAATAGTTTCAGTTTACATAAACAGGCTAAATCAAgtaagattccttcttgagcattgatattagtgatctgatgaactttggagagaggaaagaaagattaaagtgagatacattattagtgaatcagtggaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccttcttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaagaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gagataca