1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGGAAAGAACCTTTTGGTCCGCTGTGATCGTGTTACTAAAACTCTTCGTCCCGGGAAGAAAAAGCTCTCTACTTGGCCTGCTCATTTGGAGATTTTCCGTgtaagttgattttggtgttgcttcatatgctattgaacttgttgtcttgtatgttgaagtttgtttcttagagaaaattgctattcaaccctttcaccat...
species | Arabidopsis thaliana |
transcript | AT3G20920.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CCGGGAAGAAAAAGCTCTCTACTTGGCCTGCTCATTTGGAGATTTTCCGT GACGATCAATCTTTCTCEST: gi|164132235|gb|ES058208.1|ES058208
genomic: CCGGGAAGAAAAAGCTCTCTACTTGGCCTGCTCATTTGGAGATTTTCCGTgtaagttgat ... tttgatgcagGACGATCAATCTTTCTC
EST: CCGGGAAGAAAA-GCTCTCTACTTGGCCTGCTCATTTGGAGATTTTCCGT GACGATCAATCTTT
genomic: CCGGGAAGAAAAAGCTCTCTACTTGGCCTGCTCATTTGGAGATTTTCCGTgtaagttgat ... tttgatgcagGACGATCAATCTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGAAAGAACCTTTTGGTCCGCTGTGATCGTGTTACTAAAACTCTTCGTCCCGGGAAGAAAAAGCTCTCTACTTGGCCTGCTCATTTGGAGATTTTCCGTgtaagttgattttggtgttgcttcatatgctattgaacttgttgtcttgtatgttgaagtttgtttcttagagaaaattgctattcaaccctttcaccat
- - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT