Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|116404909|gb|EG447501.1|EG447501EST: CTCCATCTATCAAATTCTTCTTTGGCCCACTCAACTTTGCAAAGGCGCAA GGACCTAAACTATATGGGTTGAGCCATGAGTCGACAACA
genomic: CTCCATCTATCAAATTCTTCTTTGGCCCACTCAACTTTGCAAAGGCGCAAgtaagtctta ... ttctgtaaagGGACCTAAACTATATGGGTTGAGCCATGAGTCGACAACA
EST:
gi|116404765|gb|EG447357.1|EG447357EST: CTCCATCTATCAAATTCTTCTTTGGCCCACTCAACTTTGCAAAGGCGCAA GGACCTAAACTATATGGGTTGAGCCATGAGTCGACAACATTTCAGCTATAC
genomic: CTCCATCTATCAAATTCTTCTTTGGCCCACTCAACTTTGCAAAGGCGCAAgtaagtctta ... ttctgtaaagGGACCTAAACTATATGGGTTGAGCCATGAGTCGACAACATTTCAGCTATAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CAAGCTCATAATAGATAACAAGTCTAATGTCTTTGGCCTTCACATTCATCCTCCATCTATCAAATTCTTCTTTGGCCCACTCAACTTTGCAAAGGCGCAAgtaagtcttaagagatatatttatttaatatcaacttcagttaccatatgcattcatacatctcttgtttctgtaaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG