1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtgatctttcgttctccatagtttccaattcacctagcataatctgattgtcatgagtatatgaatactgtttgtggtactaattctgtgtctgaaattttctcaacagGGTTTTCTGCATATAGATGAATATCCTCCTGATGCTAATCAAGGATTCGACATTCCATCGGCTTTGATAAGCTTCCCCGATCATCATGCTAGTTTAGATT
species | Arabidopsis thaliana |
transcript | AT3G07140.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TATCAATTGAATATGATAAG GGTTTTCTGCATATAGATGAATATCCTCCTGATGCTAATCAAGGATTCGAC
genomic: TATCAATTGAATATGATAAGgtgatctttc ... ttctcaacagGGTTTTCTGCATATAGATGAATATCCTCCTGATGCTAATCAAGGATTCGAC
gagtatatgaatactgtttgtggtactaattctgtgtctgaaattttctcaacagGGTTTTCTGCATATAGATGAATATCCTCCTGATGCTAATCAAGGATTCGACATTCCATCGGCTTTGATAAGCTTCCCCGATCATCATGCTAGTTTAGATT
tactaat putative branch site (score: 1)
ttttctc putative PPT
tgaaatttt TA-rich tract