1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtattagttcttctttatagttcaagtggattcttatgcttaaacattttggtttgggaattaactatgcatttatgttttctgaaattctcggatagAGGCATGACGCGACAGTAAGCACGGTGCATGCGTTTACAAAGGATCCAGAGCACATTACTAGGAAGGCGGATATCGTTATAGCAGCAGCGGGTATACCTA
species | Arabidopsis thaliana |
transcript | AT2G38660.3 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TCATAGGCAGAAGCAACATCGTTGGACTACCAATGTCTTTATTATTGCAG AGGCATGACGCGACAGTAAGCACGGTGCATGCGTTTACAAAGGATCCAGAG
genomic: TCATAGGCAGAAGCAACATCGTTGGACTACCAATGTCTTTATTATTGCAGgtattagttc ... tctcggatagAGGCATGACGCGACAGTAAGCACGGTGCATGCGTTTACAAAGGATCCAGAG
acattttggtttgggaattaactatgcatttatgttttctgaaattctcggatagAGGCATGACGCGACAGTAAGCACGGTGCATGCGTTTACAAAGGATCCAGAGCACATTACTAGGAAGGCGGATATCGTTATAGCAGCAGCGGGTATACCTA
aattaac putative branch site (score: 2)
ttctc putative PPT
atttatgtttt TA-rich tract