Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|116394012|gb|EG436604.1|EG436604EST: CTACAGGAACATCAGTTTTGGAGTCTAACAAAGAGCAGTTTATTGTATTG GCTAGAGCTGATCCTGTAGGAGAAAAGCGTAAAGCAGAAGATATTTCAA-C
genomic: CTACAGGAACATCAGTTTTGGAGTCTAACAAAGAGCAGTTTATTGTATTGgtaagtgttt ... actattgcagGCTAGAGCTGATCCTGTAGGAGAAAAGCGTAAAGCAGAGGATATT-CAAAC
EST:
gi|116394010|gb|EG436602.1|EG436602EST: CTACAGGAACATCAGTTTTGGAGTCTAACAAAGAGCAGTTTATTGTATTG GCTAGAGCTGATCCTGTAGGAGAAAAGCGTAAAGCAGAGGATATTCAAACT
genomic: CTACAGGAACATCAGTTTTGGAGTCTAACAAAGAGCAGTTTATTGTATTGgtaagtgttt ... actattgcagGCTAGAGCTGATCCTGTAGGAGAAAAGCGTAAAGCAGAGGATATTCAAACT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGACAGTGTTGGTACCATGCAATTGCCTAAACTTCAGCAAATGCCTGAGGCTACAGGAACATCAGTTTTGGAGTCTAACAAAGAGCAGTTTATTGTATTGgtaagtgttttactacgagtgtgatatctcatcttttctatccacgtactttccttacttgcttataacaaatcctgaccatatgtgttctctttgattactattgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG