Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|116415914|gb|EG458506.1|EG458506EST: GAATGTACAACAACTGGTTGGATAGCCTTTATCGATCCAGTCTGAAGCAA GCTCAGATATCCTCACTGATCTCTTTTTAGCTTCTAATCTGGCAGTGAACC
genomic: GAATGTACAACAACTGGTTGGATAGCCTTTATCGATCCAGTCTGAAGCAAgtaagcttct ... catgatgcagGCTCAGATATCCTCACTGATCTCTTTTTAGCTTCTAATCTGGCAGTGAACC
EST:
gi|116415918|gb|EG458510.1|EG458510EST: GAATGTACAACAACTGGTTGGATAGCCTTTATCGATCCAGTCTGAAGCAA GCTCAGATATCCTCACTGATCTCTTTTTAGCTTCTAATCTGGCAGTGAACC
genomic: GAATGTACAACAACTGGTTGGATAGCCTTTATCGATCCAGTCTGAAGCAAgtaagcttct ... catgatgcagGCTCAGATATCCTCACTGATCTCTTTTTAGCTTCTAATCTGGCAGTGAACC
EST:
gi|116415909|gb|EG458501.1|EG458501EST: GAATGTACAACAACTGGTTGGATAGCCTTTATCGATCCAGTCTGAAGCAA GCTCAGATATCCTCACTGATCTCTTTTTAGCTTCTAATCTGGCAGTGAACC
genomic: GAATGTACAACAACTGGTTGGATAGCCTTTATCGATCCAGTCTGAAGCAAgtaagcttct ... catgatgcagGCTCAGATATCCTCACTGATCTCTTTTTAGCTTCTAATCTGGCAGTGAACC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GACATAACTGTAAGATCTTGTTTCGTAACCGGGCAAGGCCGCAAGAATCAGAATGTACAACAACTGGTTGGATAGCCTTTATCGATCCAGTCTGAAGCAAgtaagcttctagcttccatatattcttggtgctatttacgttctgcgagtcaagttgatgtttggttagttttcgttgtcatgatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA