1 5' 3' | 2 5' 3' | 3 5' 3' |
TGGCTAGCTGGTACGAGCACATTAGCCGCACAGTCAGTCTAGTGCTTTGCAAGAATCATCACTTGTTGGAATTTCTCACCAGGCTACTCACCAGAAACAGgtaccattaatttatctactggagcttttctttttggtatgaaaaatttattagacgtagaacaattaatgtagccagacacctttaaatctcttcctca...
species | Arabidopsis thaliana |
transcript | AT1G64670.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTCACCAGGCTACTCACCAGAAACAG GATGCGAACGTACTTGATAGAAGGGTTCTTGTGTCACACACATAACGCGTCEST: gi|86076011|gb|DR371768.1|DR371768
genomic: CTCACCAGGCTACTCACCAGAAACAGgtaccattaa ... acgcatgcagGATGCGAACGTACTTGATAGAAGGGTTCTTGTGTCACACACATAACGCGTC
EST: AAGAATCATCACTTGTTGGAATTTCTCACCAGGCTACTCACCAGAAACAG GATGCGAACGTACTTGATAGAAGGGTTCTTGTGTCACACACATAACGCGTC
genomic: AAGAATCATCACTTGTTGGAATTTCTCACCAGGCTACTCACCAGAAACAGgtaccattaa ... acgcatgcagGATGCGAACGTACTTGATAGAAGGGTTCTTGTGTCACACACATAACGCGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGCTAGCTGGTACGAGCACATTAGCCGCACAGTCAGTCTAGTGCTTTGCAAGAATCATCACTTGTTGGAATTTCTCACCAGGCTACTCACCAGAAACAGgtaccattaatttatctactggagcttttctttttggtatgaaaaatttattagacgtagaacaattaatgtagccagacacctttaaatctcttcctca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - atgaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tagaacaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tcttcctc