Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|86073974|gb|DR369731.1|DR369731EST: CAGACGAGATAATGGAGAGATCTACGCTCAAACGAAC ATGGAGTATTCCTGATTTTGAGCCTGTTAAGTCTCTGCGTTCGACTTTGAT
genomic: CAGACGAGATAATGGAGAGATCTACGCTCAAACGAACatcgagtttt ... tcaaacgaacATCGAGTATTCCTGATTTTGAGCCTGTTAAGTCTCTGCGTTCGACTTTGAT
EST:
gi|164052791|gb|ES172847.1|ES172847EST: AGATCTACGCTCAAACGAAC ATCGAGTATTCCTGATTTTGAGCCTGTTAAGTCTCTGC-TTCGACTTTGAT
genomic: AGATCTACGCTCAAACGAACatcgagtttt ... tcaaacgaacATCGAGTATTCCTGATTTTGAGCCTGTTAAGTCTCTGCGTTCGACTTTGAT
EST:
gi|124793487|gb|EH883166.1|EH883166EST: CTACGCTCAAACGAAC ATCGAGTATTCCTGATTTTGAGCCTGTTAAGTCTCTGCGTTCGACTTTGAT
genomic: CTACGCTCAAACGAACatcgagtttt ... tcaaacgaacATCGAGTATTCCTGATTTTGAGCCTGTTAAGTCTCTGCGTTCGACTTTGAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TCGAAAGACGACATTAAAAGAAAAAAAACAGACGAGATAATGGAGAGATCTACGCTCAAACGAACatcgagttttccagatattgaggctgttcaggggtgttcgactttgaatttgctgccaaaagccggatctagatctacgctcaaacgaac
- - - - - - - - AAAGAA
- - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - GAGATC