1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gttagaacttgaaggattttgatctctataatggagattgcattgatgaatctcttgctgctgctgctacagATTCAAGATAATTGGCCCTCTGTGTTGTTTGCAATGGCGGGTGGGGTTGGTTTAAGTATTGGAAACCTTGCTACTCAGTATTCTTTAGCTTTTGTTGGTC
species | Arabidopsis thaliana |
transcript | AT1G26440.3 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TAGGTGAAAGTACACATGAGGCACCAAGTTTCATTACACAACTCACTCAG ATTCAAGATAATTGGCCCTCTGTGTTGTTTGCAATGGCGGG
genomic: TAGGTGAAAGTACACATGAGGCACCAAGTTTCATTACACAACTCACTCAGgttagaactt ... gctgctacagATTCAAGATAATTGGCCCTCTGTGTTGTTTGCAATGGCGGG
tttgatctctataatggagattgcattgatgaatctcttgctgctgctgctacagATTCAAGATAATTGGCCCTCTGTGTTGTTTGCAATGGCGGGTGGGGTTGGTTTAAGTATTGGAAACCTTGCTACTCAGTATTCTTTAGCTTTTGTTGGTC
cattgat putative branch site (score: 4)
tctataat TA-rich tract