1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaactttactacaatgatgctataatcaaaacactctaaaacagtgaagttgttcatcaagaagattctgtgtacatacacttcactaatatgcttgtttggtttttggtgcagCCCGGGTTTGCTCGTCCACACATGAAGCATTAACATGTTTGAAGACAGATCAGATCTGATGTTGTCTCTTTACTACATTTATTTTTTTGTTTGTTTCCTC
species | Arabidopsis thaliana |
transcript | AT1G18550.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CATCAAGAAGCTCCTTCAAAACTGCTTCAG CCCGGGTTTGCTCGTCCACACATGAAGCATTAACATGTTTG
genomic: CATCAAGAAGCTCCTTCAAAACTGCTTCAGgtaactttac ... tttggtgcagCCCGGGTTTGCTCGTCCACACATGAAGCATTAACATGTTTG
agaagattctgtgtacatacacttcactaatatgcttgtttggtttttggtgcagCCCGGGTTTGCTCGTCCACACATGAAGCATTAACATGTTTGAAGACAGATCAGATCTGATGTTGTCTCTTTACTACATTTATTTTTTTGTTTGTTTCCTC
cactaat putative branch site (score: 2)
ttttt putative PPT
actaatat TA-rich tract