Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaacattccattttcgcaatggactagtgattttgtcattccaaaactgaagactatagtatgtatataacttattaattgtctttgaacagATCGGGGGACCATGGTGGCCGGTTCCATTGGGCCGCAGGGATGGACGCATCTCGAAATTGAACGATGCATTGCTAAATTTACCATCTCCTTTCGCCGACA

Basic information

species Arabidopsis thaliana
transcript AT1G05250.1
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

attccaaaactgaagactatagtatgtatataacttattaattgtctttgaacagATCGGGGGACCATGGTGGCCGGTTCCATTGGGCCGCAGGGATGGACGCATCTCGAAATTGAACGATGCATTGCTAAATTTACCATCTCCTTTCGCCGACA
                                   tattaat  putative branch site (score: 2)
                                         ttgtcttt  CT-rich tract
               actatagtatgtatat  TA-rich tract