Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAATAACTCTAACTACAAGAACGATACTATTATCCGCAAGGAGGTATTTCTCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttctctctctcttccgatttgcttctctcttgttaattgtccgcgttttggtcaatcgacgctataatagccaattagggttttagtgatttt...

Basic information

species Arabidopsis thaliana
transcript AT1G02140.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86039391|gb|DR335146.1|DR335146
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|47828633|gb|CK118317.1|CK118317
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039380|gb|DR335135.1|DR335135
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039378|gb|DR335133.1|DR335133
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039355|gb|DR335110.1|DR335110
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|164146896|gb|EL998485.1|EL998485
EST:     GTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTG
genomic: GTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTG
EST: gi|124716799|gb|EH808201.1|EH808201
EST:     CCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: CCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039340|gb|DR335095.1|DR335095
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|124915385|gb|EH989259.1|EH989259
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAAGAAGACGATAACAATTGGCCGGAACCTGACCGT
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAA-GAAGACGATAACAATTGGCCGGAACCTGACCGT
EST: gi|125032260|gb|EL104529.1|EL104529
EST:     TGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039381|gb|DR335136.1|DR335136
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039364|gb|DR335119.1|DR335119
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039375|gb|DR335130.1|DR335130
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039385|gb|DR335140.1|DR335140
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039343|gb|DR335098.1|DR335098
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039353|gb|DR335108.1|DR335108
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|163968229|gb|EL983866.1|EL983866
EST:     GAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCT
genomic: GAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCT
EST: gi|86039371|gb|DR335126.1|DR335126
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039395|gb|DR335150.1|DR335150
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039351|gb|DR335106.1|DR335106
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039357|gb|DR335112.1|DR335112
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039349|gb|DR335104.1|DR335104
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039352|gb|DR335107.1|DR335107
EST:     TCACCCTCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAACACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039348|gb|DR335103.1|DR335103
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|47828070|gb|CK117754.1|CK117754
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039396|gb|DR335151.1|DR335151
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039387|gb|DR335142.1|DR335142
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTSTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|164121747|gb|ES137801.1|ES137801
EST:     TNACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039365|gb|DR335120.1|DR335120
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039379|gb|DR335134.1|DR335134
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039383|gb|DR335138.1|DR335138
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039350|gb|DR335105.1|DR335105
EST:     TCACCCTCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAACACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|124730157|gb|EH821559.1|EH821559
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTT
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTT
EST: gi|86039382|gb|DR335137.1|DR335137
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039397|gb|DR335152.1|DR335152
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039342|gb|DR335097.1|DR335097
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|164186738|gb|ES191432.1|ES191432
EST:     TGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039367|gb|DR335122.1|DR335122
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039384|gb|DR335139.1|DR335139
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039393|gb|DR335148.1|DR335148
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039394|gb|DR335149.1|DR335149
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039344|gb|DR335099.1|DR335099
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|47829604|gb|CK119288.1|CK119288
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039372|gb|DR335127.1|DR335127
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|124764681|gb|EH854811.1|EH854811
EST:     CGTATCGTCTCCGAGAGCGAG                         ATTCTGAAGGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: CGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039346|gb|DR335101.1|DR335101
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
EST: gi|86039366|gb|DR335121.1|DR335121
EST:     TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAG                         ATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG
genomic: TCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttc ... ctgcgggtagATTCTGAAAGAAGACGATAACAATTGGCCGGAACCTGACCGTGTTGGAAAG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CAATAACTCTAACTACAAGAACGATACTATTATCCGCAAGGAGGTATTTCTCACCCCCGCCGTGCTCAAGGAATGCAAGCGTATCGTCTCCGAGAGCGAGgtcctttttctctctctcttccgatttgcttctctcttgttaattgtccgcgttttggtcaatcgacgctataatagccaattagggttttagtgatttt

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctctct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctcttg