1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GTTAGTCTTCCTGATATAGGTGAATCAACTGTTGACCTCATGAACACAATATACACAATAATGGAGCCCCATTTTAAAGGGTATAATCTTTGGCAGgttagttctcaagagaataattactcaattgctgcttttcaatattgtgtgtatacttcagtgttagatgcatccttattcatgaccttgttaacaactt...
species | Zea mays |
transcript | GRMZM5G864166_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CAATAATGGAGCCCCATTTTAAAGGGTATAATCTTTGGCAG TTAGATGGCCGACCTATGAGTGGTGACATTGGCCGAGGTGCAACAAGGGAGEST: gi|71772666|gb|DR970593.1|DR970593
genomic: CAATAATGGAGCCCCATTTTAAAGGGTATAATCTTTGGCAGgttagttctc ... tttggaacagTTAGATGGCCGACCTATGAGTGGTGACATTGGCCGAGGTGCAACAAGGGAG
EST: CAATATACACAATAATGGAGCCCCATTTTAAAGGGTATAATCTTTGGCAG TTAGATGGCCGACCTATGAGTGGTGACATTGGCCGAGGTGCAACAAGGGAGEST: gi|71756436|gb|DR954373.1|DR954373
genomic: CAATATACACAATAATGGAGCCCCATTTTAAAGGGTATAATCTTTGGCAGgttagttctc ... tttggaacagTTAGATGGCCGACCTATGAGTGGTGACATTGGCCGAGGTGCAACAAGGGAG
EST: TAAAGGGTATATTCTTTGGCAG TTAGATGGCCGACCTATGAGTGGTGACATTGGCCGAGGTGCAACAAGGGAGEST: gi|86469098|gb|DY235468.1|DY235468
genomic: TAAAGGGTATAATCTTTGGCAGgttagttctc ... tttggaacagTTAGATGGCCGACCTATGAGTGGTGACATTGGCCGAGGTGCAACAAGGGAG
EST: CAATATACACAATAATGGAGCCCCATTTTAAAGGGTATAATCTTTGGCAG TTAGATGGCCGACCTATGAGTGGTGACATTGGCCGAGGTGCAACAAGGGAGEST: gi|50326456|gb|CO521582.1|CO521582
genomic: CAATATACACAATAATGGAGCCCCATTTTAAAGGGTATAATCTTTGGCAGgttagttctc ... tttggaacagTTAGATGGCCGACCTATGAGTGGTGACATTGGCCGAGGTGCAACAAGGGAG
EST: CAATATACACAATAATGGAGCCCCATTTTAAAGGGTATAATCTTTGGCAG TTAGATGGCCGACCTATGAGTGGTGACATTGGCCGAGGTGCAACAAGGGAGEST: gi|50335340|gb|CO530466.1|CO530466
genomic: CAATATACACAATAATGGAGCCCCATTTTAAAGGGTATAATCTTTGGCAGgttagttctc ... tttggaacagTTAGATGGCCGACCTATGAGTGGTGACATTGGCCGAGGTGCAACAAGGGAG
EST: CAATATACACAATAATGGAGCCCCATTTTAAAGGGTATAATCTTTGGCAG TTAGATGGCCGACCTATGAGTGGTGACATTGGCCGAGGTGCAACAAGGGAG
genomic: CAATATACACAATAATGGAGCCCCATTTTAAAGGGTATAATCTTTGGCAGgttagttctc ... tttggaacagTTAGATGGCCGACCTATGAGTGGTGACATTGGCCGAGGTGCAACAAGGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTAGTCTTCCTGATATAGGTGAATCAACTGTTGACCTCATGAACACAATATACACAATAATGGAGCCCCATTTTAAAGGGTATAATCTTTGGCAGgttagttctcaagagaataattactcaattgctgcttttcaatattgtgtgtatacttcagtgttagatgcatccttattcatgaccttgttaacaactt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caagagaa