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TGATTCTGCCATCATCATGGAACTTGAGTTGCAATGGGATGGCAATCCCAATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAGgtaatatgctgtagttatatgttacattaaagaagagaaaggtatatgaatccctgcaatctggtttactattcaagaatccccccccaagtttataggg...
species | Zea mays |
transcript | GRMZM2G049347_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAG GTGAAAAATATTGGATTCACAGGAGTACTTCGGCTCATATTTAAACCGCTGEST: gi|149108271|gb|EE292611.2|EE292611
genomic: ATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAGgtaatatgct ... tccatgttagGTGAAAAATATTGGATTCACAGGAGTACTTCGGCTCATATTTAAACCGCTG
EST: ATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAG GTGAAAAATATTGGATTCACAGGAGTACTTCGGCTCATATTTAAACCGCTGEST: gi|149096357|gb|EE182083.2|EE182083
genomic: ATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAGgtaatatgct ... tccatgttagGTGAAAAATATTGGATTCACAGGAGTACTTCGGCTCATATTTAAACCGCTG
EST: ATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAG GTGAAAAATATTGGATTCACAGGAGTACTTCGGCTCATATTTAAACCGCTGEST: gi|148971875|gb|EE022637.2|EE022637
genomic: ATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAGgtaatatgct ... tccatgttagGTGAAAAATATTGGATTCACAGGAGTACTTCGGCTCATATTTAAACCGCTG
EST: ATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAG GTGAAAAATATTGGATTCACAGGAGTACTTCGGCTCATATTTAAACCGCTGEST: gi|149000007|gb|EE037098.2|EE037098
genomic: ATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAGgtaatatgct ... tccatgttagGTGAAAAATATTGGATTCACAGGAGTACTTCGGCTCATATTTAAACCGCTG
EST: ATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAG GTGAAAAATATTGGATTCACAGGAGTACTTCGGCTCATATTTAAACCGCTGEST: gi|211319262|gb|FL042435.1|FL042435
genomic: ATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAGgtaatatgct ... tccatgttagGTGAAAAATATTGGATTCACAGGAGTACTTCGGCTCATATTTAAACCGCTG
EST: ATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAG GTGAAAAATATTGGATTCACAGGAGTACTTCGGCTCATATTTAAACCGCTGEST: gi|149060778|gb|EE157228.2|EE157228
genomic: ATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAGgtaatatgct ... tccatgttagGTGAAAAATATTGGATTCACAGGAGTACTTCGGCTCATATTTAAACCGCTG
EST: ATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAG GTGAAAAATATTGGATTCACAGGAGTACTTCGGCTCATATTTAAACCGCTG
genomic: ATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAGgtaatatgct ... tccatgttagGTGAAAAATATTGGATTCACAGGAGTACTTCGGCTCATATTTAAACCGCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGATTCTGCCATCATCATGGAACTTGAGTTGCAATGGGATGGCAATCCCAATATAGTACTTGACATCCAAACAACACTTGGAATTTCTCTTCCTGTACAGgtaatatgctgtagttatatgttacattaaagaagagaaaggtatatgaatccctgcaatctggtttactattcaagaatccccccccaagtttataggg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aagagaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccccccc