1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GGAGGGGCAGGATGCTCCATCAACTGTAAATGCGATGATTGTAGAAACCCATTTGGGAGAAAAGgtaatgcaattaaggaactggaaaatgaagtatagtgaatgattttaaagtgggagttagatatctagtttgattctgtttggtatcttatattcttatt...
species | Zea mays |
transcript | GRMZM2G015097_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CTCCATCAACTGTAAATGCGATGATTGTAGAAACCCATTTGGGAGAAAAG TCGGCGTTATTTTGGACGGTAAAAGCAGTCTTACTGCACCTATACTGCACGEST: gi|76014379|gb|DT941549.1|DT941549
genomic: CTCCATCAACTGTAAATGCGATGATTGTAGAAACCCATTTGGGAGAAAAGgtaatgcaat ... tattctgcagTCGGCGTTATTTTGGACGGTAAAAGCAGTCTTACTGCACCTATACTGCACG
EST: CTCCATCAACTGTAAATGCGATGATTGTAGAAACCCATTTAGGAGAAAAG TCGGCGTTATTTTGGACGGTAAAAGCAGTCTTACTGCACCTATACTGCACGEST: gi|50329985|gb|CO525111.1|CO525111
genomic: CTCCATCAACTGTAAATGCGATGATTGTAGAAACCCATTTGGGAGAAAAGgtaatgcaat ... tattctgcagTCGGCGTTATTTTGGACGGTAAAAGCAGTCTTACTGCACCTATACTGCACG
EST: CTCCATCAACTGTAAATGCGATGATTGTAGAAACCCATTTGGGAGAAAAG TCGGCGTTATTTTGGACGGTAAAAGCAGTCTTACTGCACCTATACTGCACGEST: gi|211286567|gb|FL198772.1|FL198772
genomic: CTCCATCAACTGTAAATGCGATGATTGTAGAAACCCATTTGGGAGAAAAGgtaatgcaat ... tattctgcagTCGGCGTTATTTTGGACGGTAAAAGCAGTCTTACTGCACCTATACTGCACG
EST: CTCCATCAACTGTAAATGCGATGATTGTAGAAACCCATTTGGGAGAAAAG TCGGCGTTATTTTGGACGGTAAAAGCAGTCTTACTGCACCTATACTGCACGEST: gi|60352310|gb|DN219283.1|DN219283
genomic: CTCCATCAACTGTAAATGCGATGATTGTAGAAACCCATTTGGGAGAAAAGgtaatgcaat ... tattctgcagTCGGCGTTATTTTGGACGGTAAAAGCAGTCTTACTGCACCTATACTGCACG
EST: CTCCATCAACTGTAAATGCGATGATTGTAGAAACCCATTTGGGAGAAAAG TCGGCGTTATTTTGGACGGTAAAAGCAGTCTTACTGCACCTATACTGCACGEST: gi|76292967|gb|DV032535.1|DV032535
genomic: CTCCATCAACTGTAAATGCGATGATTGTAGAAACCCATTTGGGAGAAAAGgtaatgcaat ... tattctgcagTCGGCGTTATTTTGGACGGTAAAAGCAGTCTTACTGCACCTATACTGCACG
EST: CTCCATCAACTGTAAATGCGATGATTGTAGAAACCCATTTGGGAGAAAAG TCGGCGTTATTTTGGACGGTAAAAGCAGTCCTACTGCACCTATACTGCACG
genomic: CTCCATCAACTGTAAATGCGATGATTGTAGAAACCCATTTGGGAGAAAAGgtaatgcaat ... tattctgcagTCGGCGTTATTTTGGACGGTAAAAGCAGTCTTACTGCACCTATACTGCACG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGGGGCAGGATGCTCCATCAACTGTAAATGCGATGATTGTAGAAACCCATTTGGGAGAAAAGgtaatgcaattaaggaactggaaaatgaagtatagtgaatgattttaaagtgggagttagatatctagtttgattctgtttggtatcttatattcttatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaatgaa