1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AGTATTCTATGACTCCATTTGGTATAGGACTACCAAGATATGACAGTGGCAGCCAACAGAGATTCAGATCATATGCACATCATCATCCCCTAATCCATAGgtatgcccaattcatgaatctgattttaagtaggttgtatcatttaaatatatggtcttgtgtttaactatgtctgtatcatttaaatatagtggtctcg...
species | Zea mays |
transcript | GRMZM2G011473_T01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GCCAACAGAGATTCAGATCATATGCACATCATCATCCTCTAATCTCATAG -CCAGCACCTCGCAGTGGGAGCAATTTGGTGGCACCACCATTGGGGTCGGEST: gi|71430308|gb|DR811358.1|DR811358
genomic: GCCAACAGAGATTCAGATCATATGCACATCATCATCCCCTAATC-CATAGgtatgcccaa ... aaaactgcagGCCAGCACCTCGCAGTGGGAGCAATTTGGTGGCACCACCATTGGGGTCGG
EST: AGCCAACAGAGATTCAGATCATATGCACATCATCATCCCCTAATCCATAG GCCAGCACCTCGCAGTGGGAGCAATTTGGTGGCACCACCATTGGGGTCGGTEST: gi|78125509|gb|DV543893.1|DV543893
genomic: AGCCAACAGAGATTCAGATCATATGCACATCATCATCCCCTAATCCATAGgtatgcccaa ... aaaactgcagGCCAGCACCTCGCAGTGGGAGCAATTTGGTGGCACCACCATTGGGGTCGGT
EST: CAGAGATTCAGATCATATGCACATCATCATCCCCTAATCCATAG GCCAGCACCTCGCAGTGGGAGCAATTTGGTGGCACCACCATTGGGGTCGGTEST: gi|31351654|gb|CD436011.1|CD436011
genomic: CAGAGATTCAGATCATATGCACATCATCATCCCCTAATCCATAGgtatgcccaa ... aaaactgcagGCCAGCACCTCGCAGTGGGAGCAATTTGGTGGCACCACCATTGGGGTCGGT
EST: AGCCAACAGAGATTCAGATCATATGCACATCATCATCCCCTAATCCATAG GCCAGCTCCTCGCAGTGGGAGCAATTTGGTGGCACCACCATTGGGGTCGAT
genomic: AGCCAACAGAGATTCAGATCATATGCACATCATCATCCCCTAATCCATAGgtatgcccaa ... aaaactgcagGCCAGCACCTCGCAGTGGGAGCAATTTGGTGGCACCACCATTGGGGTCGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTATTCTATGACTCCATTTGGTATAGGACTACCAAGATATGACAGTGGCAGCCAACAGAGATTCAGATCATATGCACATCATCATCCCCTAATCCATAGgtatgcccaattcatgaatctgattttaagtaggttgtatcatttaaatatatggtcttgtgtttaactatgtctgtatcatttaaatatagtggtctcg
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