1 5' 3' | 2 5' 3' | 3 5' 3' |
TAGCTGCTGGAGAAGAAAGTGAGGAGGTTGCCTTGCAGAATGATAGAATATTTGGAGCACTTGAGGCTATATATCCACGGCCGTCGAATATACCCCCAAAgtaagcattatgcattttagtttgccattcttaagatttctctcttctcattccttacactcttttctgcgccaatccag
species | Zea mays |
transcript | GRMZM2G028492_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTTGGAGCACTTGAGGCTATATATCCACGGCCGTCGAATATACCCCCAAA CCCATTTGTTACTCCTGATGTGAAAGACTCACAATATGATGATTCGCGAACEST: gi|71324055|gb|DR798716.1|DR798716
genomic: TTTGGAGCACTTGAGGCTATATATCCACGGCCGTCGAATATACCCCCAAAgtaagcatta ... gccaatccagCCCATTTGTTACTCCTGATGTGAAAGACTCCCAATATGATGATTCCCGAAC
EST: TTTGGAGCACTTGAGGCTATATATCCACGGCCGTCGAATATACCCCCAAA CCCATTTGTTACTCCTGATGTGAAAGACTCCCAATATGATGATTCCCGAACEST: gi|71422392|gb|DR805714.1|DR805714
genomic: TTTGGAGCACTTGAGGCTATATATCCACGGCCGTCGAATATACCCCCAAAgtaagcatta ... gccaatccagCCCATTTGTTACTCCTGATGTGAAAGACTCCCAATATGATGATTCCCGAAC
EST: TTTGGAGCACTTGAGGCTATATATCCACGGCCGTCGAATATACCCCCAAA CCCATTTGTTACTCCTGATGTGAAAGACTCCCAATATGATGATTCCCGAAC
genomic: TTTGGAGCACTTGAGGCTATATATCCACGGCCGTCGAATATACCCCCAAAgtaagcatta ... gccaatccagCCCATTTGTTACTCCTGATGTGAAAGACTCCCAATATGATGATTCCCGAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAGCTGCTGGAGAAGAAAGTGAGGAGGTTGCCTTGCAGAATGATAGAATATTTGGAGCACTTGAGGCTATATATCCACGGCCGTCGAATATACCCCCAAAgtaagcattatgcattttagtttgccattcttaagatttctctcttctcattccttacactcttttctgcgccaatccag
- - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA