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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCGATGAACTGGCCTCGTTCTCCGACTCGCCCGCGCCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagttgagattatccgtcgtcgtgagaacaagcgattgaacgaaagaaccgactcggcattagtcagtgtgcttgtaatcgatttggctgtaaa...

Basic information

species Zea mays
transcript GRMZM2G130034_T01
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G130034_T01 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os12g40550.1 (Oryza sativa), 5'ss of exon 2
ATCGATGAACTGGCCTCGTTCTCCGACTCGCCCGCGCCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagttgagattatccgtcgtcgtgagaacaagcgattgaacgaaagaaccga-ctcggcattagtcagtgtgcttgtaatcgatttggctgtaaa-
|| ||||| ||||| ||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||| ||||| ||||||||||   || |||   |    ||   |   |            ||        |  |    |||   ||| ||  | |    || | |     ||| | | || 
ATTGATGAGCTGGCTTCGTTCTCCGACTCGCCGGTGCCGTCGGTGACCCGCGTTCTGTACAGCGACAAGGACGTGCAAGCTCGAAGgttttcccgttctcac-gcccagtgcgattttctttcttttttttttttttgttctactctcatgattcgtgggaggaggtg-atttcccatggatttgaac
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211310352|gb|FL001435.1|FL001435
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|71305489|gb|DR788882.1|DR788882
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|148941174|gb|EC886056.2|EC886056
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|30031746|gb|CB833597.1|CB833597
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|71775247|gb|DR973125.1|DR973125
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|71434107|gb|DR815157.1|DR815157
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGGATAATGAATCCACTTGGCCTTGTTGTTCGAGAAGATG
genomic: C-GTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGG-ATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATG
EST: gi|78086441|gb|DV514834.1|DV514834
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|148969605|gb|EE020450.2|EE020450
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|211312372|gb|FL001443.1|FL001443
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|213178277|gb|FM185022.1|FM185022
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|211310349|gb|FL001432.1|FL001432
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|76015424|gb|DT942594.1|DT942594
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|32919442|gb|CF024254.1|CF024254
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|50323473|gb|CO518599.1|CO518599
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|91873539|gb|EB403496.1|EB403496
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|211312369|gb|FL001440.1|FL001440
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|86473059|gb|DY239429.1|DY239429
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCGGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|50324880|gb|CO520006.1|CO520006
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|91874398|gb|EB404355.1|EB404355
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|211312370|gb|FL001441.1|FL001441
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|31361617|gb|CD445974.1|CD445974
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|211312371|gb|FL001442.1|FL001442
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|148983478|gb|EE029496.2|EE029496
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|71441173|gb|DR822223.1|DR822223
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|211312376|gb|FL001447.1|FL001447
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|211312373|gb|FL001444.1|FL001444
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|149103753|gb|EE289159.2|EE289159
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|71427278|gb|DR808328.1|DR808328
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|31356201|gb|CD440558.1|CD440558
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|148940595|gb|EC885401.2|EC885401
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|211310353|gb|FL001436.1|FL001436
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|78107618|gb|DV526036.1|DV526036
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|149110741|gb|EE190584.2|EE190584
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGTCTTGTTGTTCGAAAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|211312380|gb|FL001451.1|FL001451
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|148944452|gb|EC889567.2|EC889567
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGC
EST: gi|211312379|gb|FL001450.1|FL001450
EST:     CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAG                         GTATATAAAAGGGATAATGAATCAACTTGGCCTTG
genomic: CCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 41 (upstream exon), 48 (downstream exon)
Score: 66

ATCGATGAACTGGCCTCGTTCTCCGACTCGCCCGCGCCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGCTGTTGGTAACATATTTGGCCGCTG


Block sizes: 41 (upstream exon), 48 (downstream exon)
Score: 106

ATCGATGAACTGGCCTCGTTCTCCGACTCGCCCGCGCCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGCTGTTGGTAACATATTTGGCCGCTG


Block sizes: 41 (upstream exon), 48 (downstream exon)
Score: 93

ATCGATGAACTGGCCTCGTTCTCCGACTCGCCCGCGCCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGCTGTTGGTAACATATTTGGCCGCTG


Block sizes: 41 (upstream exon), 48 (downstream exon)
Score: 67

ATCGATGAACTGGCCTCGTTCTCCGACTCGCCCGCGCCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagt ... tgttctctagGTATATAAAAGGGATAATGAATCAACTTGGCCTTGTTGTTCGAGAAGATGCTGTTGGTAACATATTTGGCCGCTG


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ATCGATGAACTGGCCTCGTTCTCCGACTCGCCCGCGCCGTCCGTGACCCGCGTTCTGTACACCGACAAGGATGTGCAGGCTCGAAGgtaacccagttgagattatccgtcgtcgtgagaacaagcgattgaacgaaagaaccgactcggcattagtcagtgtgcttgtaatcgatttggctgtaaa

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gagaacaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aacgaaag