1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CCTCTTCAGCCAGGCCAAGAAAGGCGAGGACTTCACATTCCTCAAGCTCGAATGCGAGCGCGTCCCCGGCGTCCCGTCCTCCTCCTTCTCCGCCTTCGGCgtaagcgcagccccccgttctctctctctatcccctcccatcgcgatcgctgcccccgatctggcgtcacgtggatcgctgccatgcctggaggcatcta...
species | Zea mays |
transcript | GRMZM2G081359_T03 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AATGCGAGCGCGTCCCCGGCGTCCCGTCCTCCTCCTTCTCCGCCTTCGGC CTGTTTGATGGGCACAATGGGAACGGGGCCGCAATTTACACCAAAGAGAATEST: gi|91877166|gb|EB407123.1|EB407123
genomic: AATGCGAGCGCGTCCCCGGCGTCCCGTCCTCCTCCTTCTCCGCCTTCGGCgtaagcgcag ... catgttacagCTGTTTGATGGGCACAATGGGAACGGGGCCGCAATTTACACCAAAGAGAAT
EST: AATGCGAGCGCGTCCCCGGCGTCCCGTCCTCCTCCTTCTCCGCCTTCGGC CTGTTTGATGGGCACAATGGGAACGGGGCCGCAATTTACACCAAAGAGAATEST: gi|78082347|gb|DV510759.1|DV510759
genomic: AATGCGAGCGCGTCCCCGGCGTCCCGTCCTCCTCCTTCTCCGCCTTCGGCgtaagcgcag ... catgttacagCTGTTTGATGGGCACAATGGGAACGGGGCCGCAATTTACACCAAAGAGAAT
EST: AATGCGAGCGCGTCCCCGGCGTCCCGTCCTCCTCCTTCTCCGCCTTCGGC CTGTTTGATGGGCACAATGGGAACGGGGCCGCAATTTACACCAAAGAGAATEST: gi|8103442|gb|AW928080.1|AW928080
genomic: AATGCGAGCGCGTCCCCGGCGTCCCGTCCTCCTCCTTCTCCGCCTTCGGCgtaagcgcag ... catgttacagCTGTTTGATGGGCACAATGGGAACGGGGCCGCAATTTACACCAAAGAGAAT
EST: AATGCGAGCGCGTCCCCGGCGTCCCGTCCTCCTCCTTCTCCGCCTTCGGC CTGTTTGATGGGCACAATGGGAACGGGGCCGCAATTTACACCAAAGAGAATEST: gi|78084540|gb|DV512933.1|DV512933
genomic: AATGCGAGCGCGTCCCCGGCGTCCCGTCCTCCTCCTTCTCCGCCTTCGGCgtaagcgcag ... catgttacagCTGTTTGATGGGCACAATGGGAACGGGGCCGCAATTTACACCAAAGAGAAT
EST: AATGCGAGCGCGTCCCCGGCGTCCCGTCCTCCTCCTTCTCCGCCTTCGGC CTGTTTGATGGGCACAATGGGAACGGGGCCGCAATTTACACCAAAGAGAAT
genomic: AATGCGAGCGCGTCCCCGGCGTCCCGTCCTCCTCCTTCTCCGCCTTCGGCgtaagcgcag ... catgttacagCTGTTTGATGGGCACAATGGGAACGGGGCCGCAATTTACACCAAAGAGAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTCTTCAGCCAGGCCAAGAAAGGCGAGGACTTCACATTCCTCAAGCTCGAATGCGAGCGCGTCCCCGGCGTCCCGTCCTCCTCCTTCTCCGCCTTCGGCgtaagcgcagccccccgttctctctctctatcccctcccatcgcgatcgctgcccccgatctggcgtcacgtggatcgctgccatgcctggaggcatcta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gcccccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tctctctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccctccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cccccga