1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TTCAAGCCCACCGTGGAATTTGCAGCTATGGCTGTTAGAGTCGCACATATGATGCGAATATTTCAAGCTATTTCAATCTTCATTCTAATTTCAAGTGCAGgtacaggacactgctaatccatgcaccccctaaaataggcttgtggttcagagggtcttgaggtttatagtttcctggacattcgagatttgtaggttgt...
species | Physcomitrella patens |
transcript | PP1S98_31V6.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GATGCGAATATTTCAAGCTATTTCAATCTTCATTCTAATTTCAAGTGCAG AGGCCTCTATCGGTGTTAACTACGGAACTTATGGAGACAACTTGCCAACACEST: gi|208351069|gb|DC913505.1|DC913505
genomic: GATGCGAATATTTCAAGCTATTTCAATCTTCATTCTAATTTCAAGTGCAGgtacaggaca ... cctgcatcagAGGCCTCTATCGGTGTTAACTACGGAACTTATGGAGACAACTTGCCAACAC
EST: GATGCGAATATTTCAAGCTATTTCAATCTTCATTCTAATTTCAAGTGCAG AGGCCTCTATCGGTGTTAACTACGGAACTTATGGAGACAACTTGCCAACACEST: gi|18344669|gb|BJ176710.1|BJ176710
genomic: GATGCGAATATTTCAAGCTATTTCAATCTTCATTCTAATTTCAAGTGCAGgtacaggaca ... cctgcatcagAGGCCTCTATCGGTGTTAACTACGGAACTTATGGAGACAACTTGCCAACAC
EST: GATGCGAATATTTCAAGCTATTTCAATCTTCATTCTAATTTCAAGTGCAG AGGCCTCTATCGGTGTTAACTACGGAACTTATGGAGACAACTTGCCAACAC
genomic: GATGCGAATATTTCAAGCTATTTCAATCTTCATTCTAATTTCAAGTGCAGgtacaggaca ... cctgcatcagAGGCCTCTATCGGTGTTAACTACGGAACTTATGGAGACAACTTGCCAACAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCAAGCCCACCGTGGAATTTGCAGCTATGGCTGTTAGAGTCGCACATATGATGCGAATATTTCAAGCTATTTCAATCTTCATTCTAATTTCAAGTGCAGgtacaggacactgctaatccatgcaccccctaaaataggcttgtggttcagagggtcttgaggtttatagtttcctggacattcgagatttgtaggttgt
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