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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAACAAGGAGGAATTATAGTTGCAGGCCCGGGTAAAAACAACATCTCATACCTTCACAGAgtatgtgcaagtgcaacaccctctattatgctccatcctttatataatatattttccttggtatttattagcttgacagcaattagttgtcaatcagcataatattcatgtcatataaacgtttttctgatatcatcatgtgaaatatattcatgtgagcag

Basic information

species Glycine max
transcript GLYMA19G36130.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|308098786|gb|HO760527.1|HO760527
EST:     GAATTATAGTTGCAGGCCCGGGTAAAAACAACATCTCATACCTTCACAGA                         GACAAGGAGGCAGGGGATGACCCAGAAATTGAAGATATCTTGAAAGCATGT
genomic: GAATTATAGTTGCAGGCCCGGGTAAAAACAACATCTCATACCTTCACAGAgtatgtgcaa ... atgtgagcagGACAAGGAGGCAGGGGATGACCCAGAAATTGAAGATATCTTGAAAGCATGT
EST: gi|120495842|gb|EH224009.1|EH224009
EST:     GAATTATAGTTGCAGGCCCGGGTAAAAACAACATCTCATACCTTCACAGA                         GACAAGGAGGCAGGGGATGACCCAGAAATTGAAGATATCTTGAAAGCATGT
genomic: GAATTATAGTTGCAGGCCCGGGTAAAAACAACATCTCATACCTTCACAGAgtatgtgcaa ... atgtgagcagGACAAGGAGGCAGGGGATGACCCAGAAATTGAAGATATCTTGAAAGCATGT
EST: gi|117557702|gb|EG702087.1|EG702087
EST:     GAATTATAGTTGCAGGCCCGGGTAAAAACAACATCTCATACCTTCACAGA                         GACAAGGAGGCAGGGGATGACCCAGAAATTGAAGATATCTTGAAAGCATGT
genomic: GAATTATAGTTGCAGGCCCGGGTAAAAACAACATCTCATACCTTCACAGAgtatgtgcaa ... atgtgagcagGACAAGGAGGCAGGGGATGACCCAGAAATTGAAGATATCTTGAAAGCATGT
EST: gi|120495642|gb|EH223809.1|EH223809
EST:     GAATTATAGTTGCAGGCCCGGGTAAAAACAACATCTCATACCTTCACAGA                         GACAAGGAGGCAGGGGATGACCCAGAAATTGAAGATATCTTGAAAGCATGT
genomic: GAATTATAGTTGCAGGCCCGGGTAAAAACAACATCTCATACCTTCACAGAgtatgtgcaa ... atgtgagcagGACAAGGAGGCAGGGGATGACCCAGAAATTGAAGATATCTTGAAAGCATGT
EST: gi|6915018|gb|AW396548.1|AW396548
EST:     GAATTATAGTTGCAGGCCCGGGTAAAAACAACATCTCATACCTTCACAGA                         GACAAGGAGGCAGGGGATGACCCAGAAATTGAAGATATCTTGAAAGCATGT
genomic: GAATTATAGTTGCAGGCCCGGGTAAAAACAACATCTCATACCTTCACAGAgtatgtgcaa ... atgtgagcagGACAAGGAGGCAGGGGATGACCCAGAAATTGAAGATATCTTGAAAGCATGT
EST: gi|31473394|gb|CD415407.1|CD415407
EST:     GAATTATAGTTGCAGGCCCGGGTAAAAACAACATCTCATACCTTCACAGA                         GACAAGGAGGCAGGGGATGACCCAGAAATTGAAGATATCTTGAAAGCATGT
genomic: GAATTATAGTTGCAGGCCCGGGTAAAAACAACATCTCATACCTTCACAGAgtatgtgcaa ... atgtgagcagGACAAGGAGGCAGGGGATGACCCAGAAATTGAAGATATCTTGAAAGCATGT