1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GAATTCTTCTTGCACCAATTCTGTGATGCACACAGCTGCACTGGAAATAGGAAACCTTTCTCCAGAGGGCGCAGggtaattctgaaatctttaattaaactcttctttttccaaatcacttcataactttgatgtacttttatgggtgcttatgatatttgtccaattctatat...
species | Glycine max |
transcript | GLYMA18G10750.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GATGCGCACAGCTGCACTGGAAATAGGAAACCTTTCTCCAGAGGGCGCAG GAAGAAGACAAATGTGTTCTACATCTTTGTGTCTATTTTGCTTGTGATACTEST: gi|192306736|gb|FG998876.1|FG998876
genomic: GATGCACACAGCTGCACTGGAAATAGGAAACCTTTCTCCAGAGGGCGCAGggtaattctg ... gatatgtgcaGAAGAAGACAAATGTGTTCTACATCTTTGTGTCTATTTTGCTTGTGATACT
EST: TCCAGAGGGCGCAG GAAGAAGACAAATGTGTTCTACATCTTTGTGTCTATTTTGCTTGTGATACTEST: gi|192334209|gb|FK026590.1|FK026590
genomic: TCCAGAGGGCGCAGggtaattctg ... gatatgtgcaGAAGAAGACAAATGTGTTCTACATCTTTGTGTCTATTTTGCTTGTGATACT
EST: GATGCACACAGCTGCACTGGAAATAGGAAACCTTTCTCCAGAGGGCGCAG GAAGAAGACAAATGTGTTCTACATCTTTGTGTCTATTTTGCTTGTGATACT
genomic: GATGCACACAGCTGCACTGGAAATAGGAAACCTTTCTCCAGAGGGCGCAGggtaattctg ... gatatgtgcaGAAGAAGACAAATGTGTTCTACATCTTTGTGTCTATTTTGCTTGTGATACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAATTCTTCTTGCACCAATTCTGTGATGCACACAGCTGCACTGGAAATAGGAAACCTTTCTCCAGAGGGCGCAGggtaattctgaaatctttaattaaactcttctttttccaaatcacttcataactttgatgtacttttatgggtgcttatgatatttgtccaattctatat
- - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - AGCTGC