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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTCTGACTTTGGCTTGGCAAAAATCTTCCCTAACAACGATAGTTGCATTAGTCACCTCACCACTCGAGTGATGGGAACCTTTGGgtaagaccacttttcatcttactacactacacgtatcataaatgcactacttgacattggtcctcattgttttattaatagaattgtttttatgtaaata...

Basic information

species Glycine max
transcript GLYMA06G08610.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|51335708|gb|CO979574.1|CO979574
EST:     AACGATAGTTGCATTAGTCACCTCACCACTCGAGTGATGGGAACCTTTGG                         GTATCTAGCTCCGGAGTATGCATCAAGTGGTAAATTGACAGATAAATCAGA
genomic: AACGATAGTTGCATTAGTCACCTCACCACTCGAGTGATGGGAACCTTTGGgtaagaccac ... ttcgttgcagGTATCTAGCTCCGGAGTATGCATCAAGTGGTAAATTGACAGATAAATCAGA
EST: gi|51343582|gb|CO984315.1|CO984315
EST:     AACGATAGTTGCATTAGTCACCTCACCACTCGAGTGATGGGAACCTTTGG                         GTATCTAGCTCCGGAGTATGCATCAAGTGGTAAATTGACAGATAAATCAGA
genomic: AACGATAGTTGCATTAGTCACCTCACCACTCGAGTGATGGGAACCTTTGGgtaagaccac ... ttcgttgcagGTATCTAGCTCCGGAGTATGCATCAAGTGGTAAATTGACAGATAAATCAGA