1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTCAAGGATTTGTGACTGTCGATGAAGTAGAAAGGCGGTTATCTTGGAGTTCTGGCCGTGCCATCGATGCCCTTGATACATTACTTGATGtaagataactaaatttcttataagaagaatccgtttctttctctttatgattaacatatactaatctcaaatcatatgtaataatgaaacatggttggctcatgcagg
species | Glycine max |
transcript | GLYMA18G11630.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATCTTGGAGTTCTGGCCGTGCCATCGATGCCCTTGATACATTACTTGATG AAGGACTTGCAATGATTGATGATGGCGATAAAGATGGCAGACGGCGGTACTEST: gi|58019358|gb|CX706100.1|CX706100
genomic: ATCTTGGAGTTCTGGCCGTGCCATCGATGCCCTTGATACATTACTTGATGtaagataact ... ctcatgcaggAAGGACTTGCAATGATTGATGATGGCGATAAAGATGGCAGACGGCGGTACT
EST: ATCTTGGAGTTCTGGCCGTGCCATCGATGCCCTTGATACATTACTTGATG AAGGACTTGCAATGATTGATGATGGCGATAAAGATGGCAGACGGCGGTACTEST: gi|58016320|gb|CX703062.1|CX703062
genomic: ATCTTGGAGTTCTGGCCGTGCCATCGATGCCCTTGATACATTACTTGATGtaagataact ... ctcatgcaggAAGGACTTGCAATGATTGATGATGGCGATAAAGATGGCAGACGGCGGTACT
EST: ATCTTGGAGTTCTGGCCGTGCCATCGATGCCCTTGATACATTACTTGATG AAGGACTTGCAATGATTGATGATGGCGATAAAGATGGCAGACGGCGGTACT
genomic: ATCTTGGAGTTCTGGCCGTGCCATCGATGCCCTTGATACATTACTTGATGtaagataact ... ctcatgcaggAAGGACTTGCAATGATTGATGATGGCGATAAAGATGGCAGACGGCGGTACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCAAGGATTTGTGACTGTCGATGAAGTAGAAAGGCGGTTATCTTGGAGTTCTGGCCGTGCCATCGATGCCCTTGATACATTACTTGATGtaagataactaaatttcttataagaagaatccgtttctttctctttatgattaacatatactaatctcaaatcatatgtaataatgaaacatggttggctcatgcagg
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