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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCTAAAAAATATGGGAGAGATCCTAAAATCTGGGGGTGCCAGCTATTCATCAGTTGTTAAGACAACTATTTTgtatgaattctattttcttcattaattttaattgtattgagtgctggcaagatgactatatactgtttatttcctccag

Basic information

species Glycine max
transcript GLYMA18G11100.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298191613|gb|HO039092.1|HO039092
EST:     CTAAAATCTGGGGGTGCCAGCTATTCATCAGTTGTTAAGACAACTATTTT                         GTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAAT
genomic: CTAAAATCTGGGGGTGCCAGCTATTCATCAGTTGTTAAGACAACTATTTTgtatgaattc ... tttcctccagGTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAAT
EST: gi|298166155|gb|HO009126.1|HO009126
EST:     CTAAAATCTGGGGGTGCCAGCTATTCATCAGTTGTTAAGACAACTATTTT                         GTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAAT
genomic: CTAAAATCTGGGGGTGCCAGCTATTCATCAGTTGTTAAGACAACTATTTTgtatgaattc ... tttcctccagGTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAAT
EST: gi|298179458|gb|HO027929.1|HO027929
EST:     CTAAAATCTGGGGGTGCCAGCTATTCATCAGTTGTTAAGACAACTATTTT                         GTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAAT
genomic: CTAAAATCTGGGGGTGCCAGCTATTCATCAGTTGTTAAGACAACTATTTTgtatgaattc ... tttcctccagGTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAAT
EST: gi|298178386|gb|HO024121.1|HO024121
EST:     CTAAAATCTGGGGGTGCCAGCTATTCATCAGTTGTTGAGACAACTATTTT                         GTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAAT
genomic: CTAAAATCTGGGGGTGCCAGCTATTCATCAGTTGTTAAGACAACTATTTTgtatgaattc ... tttcctccagGTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAAT