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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGGACTGTGATGAACATAAAAGCGTTTGCGGTAAATATGGGGTATCTGGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactttgcccatttcctttactttcacactttttttttgtaccatagaaaatgttagaaatgtgttcctgttcttaacttgtagctgttcattgcatctgatatccacatttgattgaattctctag

Basic information

species Glycine max
transcript GLYMA19G41690.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298196646|gb|HO041389.1|HO041389
EST:     GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAA                         GTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
genomic: GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactt ... aattctctagGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
EST: gi|151396704|gb|EV266577.1|EV266577
EST:     GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAA                         GTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
genomic: GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactt ... aattctctagGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
EST: gi|193530156|gb|FK486173.1|FK486173
EST:     GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAA                         GTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTG
genomic: GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactt ... aattctctagGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTG
EST: gi|7146459|gb|AW508381.1|AW508381
EST:     GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAA                         GTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
genomic: GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactt ... aattctctagGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
EST: gi|15812329|gb|BI784604.1|BI784604
EST:     GGTTACCCTACCATTCCATGGTTTCCTAAGGGATCTCTAGAACCTAAAAA                         GTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
genomic: GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactt ... aattctctagGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
EST: gi|7925424|gb|AW831389.1|AW831389
EST:     GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAA                         GTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTGTGTGAACATTGA
genomic: GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactt ... aattctctagGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
EST: gi|209699181|gb|BW664358.1|BW664358
EST:     GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAA                         GTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
genomic: GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactt ... aattctctagGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
EST: gi|298164091|gb|HO013736.1|HO013736
EST:     GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAA                         GTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCG
genomic: GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactt ... aattctctagGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCG
EST: gi|207750098|gb|GD726052.1|GD726052
EST:     GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAG                         GTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
genomic: GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactt ... aattctctagGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
EST: gi|192330240|gb|FK019835.1|FK019835
EST:     GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAA                         GTATGAAGGTGCACGTACCGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
genomic: GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactt ... aattctctagGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
EST: gi|208199962|gb|GD998635.1|GD998635
EST:     GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAA                         GTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
genomic: GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactt ... aattctctagGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
EST: gi|192299182|gb|FG990454.1|FG990454
EST:     GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAA                         GTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
genomic: GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactt ... aattctctagGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
EST: gi|18692859|gb|BM521707.1|BM521707
EST:     GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAA                         GTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
genomic: GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactt ... aattctctagGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
EST: gi|151410365|gb|EV280180.1|EV280180
EST:     GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAA                         GTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA
genomic: GGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAgtgagcactt ... aattctctagGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGCGTTTGTGAACATTGA