1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAGgtacaagaagaaaactctgaacttacaggctcattttgtaataccagggaattttcttagtatttgtgctttgtcacttttctcttcactttcagataat...
species | Glycine max |
transcript | GLYMA18G11100.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAG GTTCTAAAAAATATGGGAGAGATCCTAAAATCTGGGGGTGCCAGCTATTCAEST: gi|298166155|gb|HO009126.1|HO009126
genomic: ACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAGgtacaagaag ... cacaatgcagGTTCTAAAAAATATGGGAGAGATCCTAAAATCTGGGGGTGCCAGCTATTCA
EST: ACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAG GTTCTAAAAAATATGGGAGAGATCCTAAAATCTGGGGGTGCCAGCTATTCAEST: gi|298179458|gb|HO027929.1|HO027929
genomic: ACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAGgtacaagaag ... cacaatgcagGTTCTAAAAAATATGGGAGAGATCCTAAAATCTGGGGGTGCCAGCTATTCA
EST: ACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAG GTTCTAAAAAATATGGGAGAGATCCTAAAATCTGGGGGTGCCAGCTATTCAEST: gi|298178386|gb|HO024121.1|HO024121
genomic: ACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAGgtacaagaag ... cacaatgcagGTTCTAAAAAATATGGGAGAGATCCTAAAATCTGGGGGTGCCAGCTATTCA
EST: ACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAG GTTCTAAAAAATATGGGAGAGATCCTAAAATCTGGGGGTGCCAGCTATTCA
genomic: ACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAGgtacaagaag ... cacaatgcagGTTCTAAAAAATATGGGAGAGATCCTAAAATCTGGGGGTGCCAGCTATTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAGgtacaagaagaaaactctgaacttacaggctcattttgtaataccagggaattttcttagtatttgtgctttgtcacttttctcttcactttcagataat
- - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gaagaaaa