1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GATAGTTTGTTTGGGCCAGAAATAAAATCAGATGCAATGAGCAGAACTGTTGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaatctgaattgtttgaaattgaaaaatattacccatacatagtctgctgtttggatctaaatttggaaatgtgctattcaagcag
species | Glycine max |
transcript | GLYMA18G10060.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGGCCTGTACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAG AGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAACEST: gi|298187958|gb|HO031915.1|HO031915
genomic: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaat ... attcaagcagAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAAC
EST: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAG AGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTAEST: gi|192328423|gb|FK020711.1|FK020711
genomic: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaat ... attcaagcagAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTA
EST: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAG AGCAAGACGATGGCCTTGAGAAATTGGAG-AGACTGTAATCAGTACTAAACEST: gi|298169593|gb|HO020953.1|HO020953
genomic: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaat ... attcaagcagAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAAC
EST: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAG AGCAAGACGATGGCEST: gi|151404720|gb|EV274534.1|EV274534
genomic: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaat ... attcaagcagAGCAAGACGATGGC
EST: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAG AGCAAGACGATGGCCTTGAGAAATTGGAAGAGACTGTAATCAGTACTAAACEST: gi|120496797|gb|EH224964.1|EH224964
genomic: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaat ... attcaagcagAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAAC
EST: TGGCCTGTACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAG AGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAACEST: gi|192328424|gb|FK020712.1|FK020712
genomic: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaat ... attcaagcagAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAAC
EST: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAG AGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAACEST: gi|298173914|gb|HO017250.1|HO017250
genomic: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaat ... attcaagcagAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAAC
EST: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAG AGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAACEST: gi|15337095|gb|BI497751.1|BI497751
genomic: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaat ... attcaagcagAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAAC
EST: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAG AGCAAGACGATGGEST: gi|298192925|gb|HO033359.1|HO033359
genomic: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaat ... attcaagcagAGCAAGACGATGG
EST: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAG AGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAACEST: gi|254334673|gb|GR844458.1|GR844458
genomic: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaat ... attcaagcagAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAAC
EST: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAG AGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAACEST: gi|192309834|gb|FK002946.1|FK002946
genomic: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaat ... attcaagcagAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAAC
EST: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAG AGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAACEST: gi|192309833|gb|FK002945.1|FK002945
genomic: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaat ... attcaagcagAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAAC
EST: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAG AGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAACEST: gi|20449153|gb|BQ253277.1|BQ253277
genomic: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaat ... attcaagcagAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAAC
EST: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAG AGCAAGACGATGGCCTTGAGAAATTGGAG
genomic: TGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaat ... attcaagcagAGCAAGACGATGGCCTTGAGAAATTGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATAGTTTGTTTGGGCCAGAAATAAAATCAGATGCAATGAGCAGAACTGTTGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGgtcacttaatctgaattgtttgaaattgaaaaatattacccatacatagtctgctgtttggatctaaatttggaaatgtgctattcaagcag
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