1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
GCTGCTGAGCATCCTCATTTAAGCATTCCAGAAACTGAAGCTGGAAGAAGCCGCAAGCAGTACCACAGGCTTATTAATCGATCTCTTATGGCTGTTTCAGgtatgtcatttttccattacacttgtatctacagtgtttattattattttcctttttccatttttcacctgagctgttcagtttcatgttatagtgattt...
species | Glycine max |
transcript | GLYMA20G37730.2 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: CCGCAAGCAGTACCACAGGCTTATTAATCGATCTCTTATGGCTGTTTCAG TTGGAGCTGCAGTGGTCGTAGTTGGGCTGGCAGCTTATAGGGTATATGCTGEST: gi|5606725|gb|AI900823.1|AI900823
genomic: CCGCAAGCAGTACCACAGGCTTATTAATCGATCTCTTATGGCTGTTTCAGgtatgtcatt ... catattacagTTGGAGCTGCAGTGGTCGTAGTTGGGCTGGCAGCTTATAGGGTATATGCTG
EST: CCGCAAGCAGTACCACAGGCTTATTAATCGATCTCTTATGGCTGTTTCAG TTGGAGCTGCAGTGGTCGTAGTTGGGCTGGCAGCTTATAGGGTATATGCTGEST: gi|254338165|gb|GR845521.1|GR845521
genomic: CCGCAAGCAGTACCACAGGCTTATTAATCGATCTCTTATGGCTGTTTCAGgtatgtcatt ... catattacagTTGGAGCTGCAGTGGTCGTAGTTGGGCTGGCAGCTTATAGGGTATATGCTG
EST: CCGCAAGCAGTACCACAGGCTTATTAATCGATCTCTTATGGCTGTTTCAG TTGGAGCTGCAGTGGTCGTAGTTGGGCTGGCAGCTTATAGGGTATATGCTGEST: gi|254344505|gb|GR851202.1|GR851202
genomic: CCGCAAGCAGTACCACAGGCTTATTAATCGATCTCTTATGGCTGTTTCAGgtatgtcatt ... catattacagTTGGAGCTGCAGTGGTCGTAGTTGGGCTGGCAGCTTATAGGGTATATGCTG
EST: CCGCAAGCAGTACCACAGGCTTATTAATCGATCTCTTATGGCTGTTTCAG TTGGAGCTGCAGTGGTCGTAGTTGGGCTGGCAGCTTATAGGGTATATGCTGEST: gi|254338166|gb|GR845522.1|GR845522
genomic: CCGCAAGCAGTACCACAGGCTTATTAATCGATCTCTTATGGCTGTTTCAGgtatgtcatt ... catattacagTTGGAGCTGCAGTGGTCGTAGTTGGGCTGGCAGCTTATAGGGTATATGCTG
EST: CCGCAAGCAGTACCACAGGCTTATTAATCGATCTCTTATGGCTGTTTCAG TTGGAGCTGCAGTGGTCGTAGTTGGGCTGGCAGCTTATAGGGTATATGCTG
genomic: CCGCAAGCAGTACCACAGGCTTATTAATCGATCTCTTATGGCTGTTTCAGgtatgtcatt ... catattacagTTGGAGCTGCAGTGGTCGTAGTTGGGCTGGCAGCTTATAGGGTATATGCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTGCTGAGCATCCTCATTTAAGCATTCCAGAAACTGAAGCTGGAAGAAGCCGCAAGCAGTACCACAGGCTTATTAATCGATCTCTTATGGCTGTTTCAGgtatgtcatttttccattacacttgtatctacagtgtttattattattttcctttttccatttttcacctgagctgttcagtttcatgttatagtgattt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT