1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
CCTGGATATGGTGATGCAGGAAATATGTATGCTGCTCAAGGTTCTGGAGCCAGGGCAGgtgctaaatatttttaactgctttggtaggtttggtttggttgtcacattgtgttattttttaatgtactgatgattgtcttttttcctctttacag
species | Glycine max |
transcript | GLYMA20G30820.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: TGGTGATGCAGGAAATATGTATGCTGCTCAAGGTTCTGGAGCCAGGGCAG TTGGATTTCCACAGEST: gi|151404880|gb|EV274694.1|EV274694
genomic: TGGTGATGCAGGAAATATGTATGCTGCTCAAGGTTCTGGAGCCAGGGCAGgtgctaaata ... ctctttacagTTGGATTTCCACAG
EST: TGGTGATGCAG-AAATATGTATGCTGCTCAAG-TTCTGGAGCCAGGGCAG TTGGATTTCCACAG
genomic: TGGTGATGCAGGAAATATGTATGCTGCTCAAGGTTCTGGAGCCAGGGCAGgtgctaaata ... ctctttacagTTGGATTTCCACAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTGGATATGGTGATGCAGGAAATATGTATGCTGCTCAAGGTTCTGGAGCCAGGGCAGgtgctaaatatttttaactgctttggtaggtttggtttggttgtcacattgtgttattttttaatgtactgatgattgtcttttttcctctttacag
- - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - GCTGCT